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BioInformatics Books

There are many online resources where you can find free BioInformatics books to download in PDF format, including online textbooks, ebooks, lecture notes, and more, covering basic, beginner, and advanced concepts for those looking for an introduction to the subject or a deeper understanding of it.

Introduction to Bioinformatics by Yildiz Technical University

This note covers the following topics: what is bioinformatics, Path to the bioinformatics, Scope of computational biology, The Central Dogma of Molecular Biology, Genomics, Proteomics, Killer application, Cells, Signaling Pathways Control gene activity, DNA the code of life and genetic information chromosomes.

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s 121Pages

Bioinformatics by Nakaya Helder

This page covers the following topics related to Bioinformatics : Text Mining Gene Selection to Understand Pathological Phenotype Using Biological Big Data, Single-Cell RNA Sequencing Procedures and Data Analysis, Computational Methods for Detecting Large-Scale Structural Rearrangements in Chromosomes, Machine Learning Approaches for Biomarker Discovery Using Gene Expression Data, Bayesian Inference of Gene Expression, Comprehensive Evaluation of Error-Correction Methodologies for Genome Sequencing Data, Plant Transcriptome Assembly: Review and Benchmarking,WeMine Aligned Pattern Clustering System for Biosequence Pattern Analysis, Rational Design of Profile Hidden Markov Models for Viral Classification and Discovery, Pattern Discovery and Disentanglement for Aligned Pattern Cluster Analysis and Protein Binding Complexes Detection.

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Computational Biology Biostatistics

The topics of notes in this site are as follows : Introduction to Bioinformatics, Sequence Alignment, Probabilistic Sequence Models , Gene Expression Analysis, Protein Structure Prediction.

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Foundations of Bioinformatics and Systems Biology

The contents in this site includes the following topics : The complete course is comprised of three modules covering Foundations of Bioinformatics, Statistics in Bioinformatics, Systems Biology. These modules holds the following contents : Introduction to bioinformatics, Sequence Alignment and Database Searching, Structural Bioinformatics, Genome Informatics: High Throughput Sequencing Applications and Analytical Methods, Approaches to statistical estimation and testing, Statistical estimation and hypothesis testing, Analyses involving associations, Pearson correlation, t-test, and log odds ratios, Linear regression, Regression models, Introduction to graphical methods for multivariate data analysis, Clustering and principal component analysis, Introduction to systems biology, Epigenome data mining to understand disease predisposition, Computational clinical decision support systems, Application of systems biology to translational medicine.

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Micorarray Methodology and Analysis

This site hold 9 lectures on various topics related to Micorarray Methodology and Analysis such as Introduction to microarray technology, Image Processing for Pedestrians, Differential Expression, Microarray Normalization, Clustering and Classification, etc.

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A Bioinformatics Study of Human Transcriptional Regulation

This PDF thesis A Bioinformatics Study of Human Transcriptional Regulation covers the following topics related to Bioinformatics : Biological background, DNA and chromosomes, Transcription, Transcriptional regulation, Medical aspects of transcriptional regulation, High-throughput technologies, DNA microarrays, Massively parallel sequencing, Biological knowledge sources, Annotations, Experimental data, Aims, Methods, Computational methods, Statistics Randomization, Local search, Analysis of high-throughput data, Experiment design, Expression analysis, ChIP-chip data analysis, ChIP-seq data analysis, Data storage and management, Results and discussion, Summary of results, Computational results, Biological results, Medical results, Additional results, Discussion.

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s 54Pages

Bioinformatics Introduction by Mark Gerstein

This note covers the following topics: Molecular Biology, Molecular Biology Information - DNA, Protein Sequence, Macromolecular Structure and Protein Structure Details, Gene Expression Datasets, New Paradigm for Scientific Computing, General Types of Informatics in Bioinformatics, Genome Sequence, Protein Sequence, Major Application: Designing Drugs, Finding Homologues, Genome Characterization.

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Introduction to Bioinformatics Lecture

This note explains the following topics: What is bioinformatics, Molecular biology primer, Biological words, Sequence assembly, Sequence alignment, Fast sequence alignment using FASTA and BLAST, Genome rearrangements, Motif finding, Phylogenetic trees and Gene expression analysis.

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s 431Pages

Bioanalytical Techniques and Bioinformatics

This note explains the following topics: Modern approaches in Bioanalysis and Bioassays, Spectroscopic techniques: UV-Visible spectroscopy, Fluorescence spectroscopy, IR spectroscopy, CD spectroscopy, and Mass spectroscopy, Light Microscopy; Fluorescence microscopy, Atomic force microscope, Electron microscope, Scanning electron microscopy, Transmission Electron microsope, Application of microscope in analyzing biological samples.

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Bioinformatics and Proteomics

This note provides a hands-on approach to students in the topics of bioinformatics and proteomics. Topics covered includes: sequence analysis, microarray expression analysis, Bayesian methods, control theory, scale-free networks, and biotechnology applications.

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Bioinformatics methods and applications for functional analysis of mass spectrometry based proteomics data

This book is intended to serve both as a textbook for short bioinformatics courses and as a base for a self teaching endeavor. It is divided in two parts: A. Bioinformatics Techniques and B. Case Studies. Each chapter of the first part addresses a specific problem in bioinformatics and consists of a theoretical part and of a detailed tutorial with practical applications of that theory using software freely available on the Internet.

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s 197Pages

Bioinformatics Sequence Analysis and Phylogenetics Lecture Notes (PDF 190P)

This book covers the following topics: biological basics needed in bioinformatics, Pairwise Alignment, Multiple Alignment, Phylogenetics, DNA, RNA, Transcription, Introns, Exons, and Splicing, Amino Acids.

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s 180Pages

Bioinformatics II Theoretical Bioinformatics and Machine Learning (PDF 394)

This book covers the following topics: Machine Learning in Bioinformatics, Theoretical Background of Machine Learning, Support Vector Machines, Error Minimization and Model Selection, Neural Networks, Bayes Techniques, Feature Selection, Hidden Markov Models.

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s 400Pages

Algorithms in Bioinformatics (PDF 175p)

This note explains the relationship between biology, bioinformatics and computer science and shows the computational approaches used in bioinformatics.

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s 175Pages

Algorithms in Bioinformatics (PDF 82p)

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Online Lectures on Bioinformatics

This note covers the following topics: Biological preliminaries, Analysis of individual sequences, Pairwise sequence comparison, Algorithms for the comparison of two sequences, Variants of the dynamic programming algorithm, Practical Sections on Pairwise Alignments, Phylogenetic Trees and Multiple Alignments and Protein Structure.

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Structural Bioinformatics

This note describes the computational challenges in structural biology and explains the computational methods for analysing and predicting macromolecular conformations and interactions and gives practice in programming techniques for structural bioinformatics.

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Introducing Bioinformatics Concepts in CS1

This note explains the basic bioinformatics concepts via a closed lab exercise and a programming project. Also discusses the implementation of these activities and some of the results/lessons we learned.

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s 9Pages

Online Lectures on Bioinformatics

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Bioinformatics Notes

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Learn about Bioinformatics and Computational Tools for Biology

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Algorithms in Bioinformatics (PDF 87P)

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Online Lectures on Bioinformatics

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Basic bioinformatics concepts, databases and tools

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NCBI Handbook

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BioInformatics (PDF 155p)

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Introduction to Bioinformatics (online Lecture Materials)

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2Can Support Portal Tutorials

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Bioinformatics, Sequence and Structural Alignment

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MATHEMATICS and BIOLOGY THE INTERFACE CHALLENGES and OPPORTUNITIES

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Introduction to Programming for Bioinformatics in Python

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Bioinformatics An Introduction

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BIOINFORMATICS lecture Notes Online

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