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Biochemistry and Structural Biology
This note covers the following topics: Structural Biology and Amino acids, History of Macromolecular Crystallography, Amino acid Chirality, Non-covalent interactions and Ramachandran Map, Secondary structures; Introduction to Protein , Alpha-domain proteins I: Coiled coils and four-helix bundle, ROP protein design, Alpha-domain proteins II: Large alpha-helical domain and globin fold, Alpha or Beta-domain proteins, Beta-domain proteins.
Author(s): Dr. R. Sankararamakrishnan
NA Pages 
Workshop In Computational Structural Biology
This note explores the concepts and algorithms that enable computational modeling of biological molecules, in both theory and practice. Topics covered includes: The basics of protein structure, Rosetta and structural modeling, Optimization techniques, Analysis of protein structures and assessment of model quality, Full atom refinement and side chain modeling, Hands-on: Side chain modeling, Homology modelin, Protein-protein docking.
Author(s): Prof. Ora Furman
NA Pages
Mathematical Techniques In Structural Biology
These are notes about using mathematics to study the molecular structure of molecules, especially long organic molecules like DNA and proteins. Topics covered includes: Molecular Genetics: DNA, Proteins, Frames and moving frames, Orthogonal transformations and Rotations, Torsion angles and pdb files, X-ray Crystallography, Lattices, and Fourier Series, Nuclear Magnetic Resonance and distance geometry, Protein Folding.
Author(s): J. R. Quine
86 Pages