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Mathematical Techniques In Structural Biology
These are notes about using mathematics to study the molecular structure of molecules, especially long organic molecules like DNA and proteins. Topics covered includes: Molecular Genetics: DNA, Proteins, Frames and moving frames, Orthogonal transformations and Rotations, Torsion angles and pdb files, X-ray Crystallography, Lattices, and Fourier Series, Nuclear Magnetic Resonance and distance geometry, Protein Folding.
Author(s): J. R. Quine
86 Pages 
Biochemistry and Structural Biology
This note covers the following topics: Structural Biology and Amino acids, History of Macromolecular Crystallography, Amino acid Chirality, Non-covalent interactions and Ramachandran Map, Secondary structures; Introduction to Protein , Alpha-domain proteins I: Coiled coils and four-helix bundle, ROP protein design, Alpha-domain proteins II: Large alpha-helical domain and globin fold, Alpha or Beta-domain proteins, Beta-domain proteins.
Author(s): Dr. R. Sankararamakrishnan
NA Pages
Workshop In Computational Structural Biology
This note explores the concepts and algorithms that enable computational modeling of biological molecules, in both theory and practice. Topics covered includes: The basics of protein structure, Rosetta and structural modeling, Optimization techniques, Analysis of protein structures and assessment of model quality, Full atom refinement and side chain modeling, Hands-on: Side chain modeling, Homology modelin, Protein-protein docking.
Author(s): Prof. Ora Furman
NA Pages