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Molecular Mechanics Tutorial (PDF 77P)
This note covers the following topics: steric energy, enthalpy of formation, comparing steric energies, energy minimization, molecular dynamics, distance geometry and d to d model conversion, free energy perturbation theory (FEP), continuum solvation electrostatics, normal mode analysis, partial atomic charges.
Author(s): Thomas W. Shattuck, Department of Chemistry, Colby College
77 Pages 
This note explains the following topics:The Interaction between two Molecules, Interaction of Macroscopic Bodies, The Effective Interaction between two Molecules, Electrostatic Forces.
Author(s): Gunnar Karlstrom and Bo Jonsson
70 Pages
Molecular Geometries and Covalent Bonding Theories
This note covers the following topics: Molecular Shapes, What Determines the Shape of a Molecule, Valence Shell Electron Pair, Repulsion Theory, Molecular Arrangments, Lone pairs and Bond Angle, Multiple Bonds and Bond Angles, Trigonal Bipyramidal arrangment, Polarity, Overlap and Bonding, Hybrid Orbitals, Valence Bond Theory, Single Bonds, Multiple Bonds, Delocalized Electrons, Orbitals in Molecules.
Author(s): Prof. Geiger, Michigan State University
54 Pages