Introduction to Molecular Mechanics by C. David Sherrill(PDF 43p)
Introduction to Molecular Mechanics by C. David Sherrill(PDF 43p)
Introduction to Molecular Mechanics by C. David Sherrill(PDF 43p)
This note covers the following topics: Stretching Interactions,
The Force-Field, Stretch Energy, Bend Energy, Torsional Energy, van der Waals
Energy, Electrostatic Energy, Fitting Atomic Charges, The Fluctuating Charge
Model, Other Polarizable Models, Parameterizing the Force Fields and Heats of
Formation.
It
describes in detail the role of theory in chemistry. Key concepts covered
include chemical kinetics, oxidation numbers, electronegativity, and application
of various theoretical methods like quantum dynamics and classical Newtonian
dynamics. This note also underlines the importance of an interface between the
laboratory and theory inasmuch as experimental measurements interact with the
theoretical models. It discusses advanced topics such as mixed classical and
quantum dynamics, the Car-Parrinello method, and their applications to large
biomolecules and polymers, giving insight into the scope and methods used in
modern theoretical chemistry.
This lecture
note set deals with basic issues in theoretical chemistry, such as specific
gravity, chemical nomenclature, atomic structure, and chemical bonding. The set
focuses on fundamental concepts in molecular chemistry, such as chemical
equations, the periodic law, and behavior of gases. The purpose is to develop a
robust understanding of the core topics from which deeper study is pursued in
theoretical chemistry, serving as an introduction for students at all levels.